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Development of the human cancer microRNA network

Sanghamitra Bandyopadhyay1 email, Ramkrishna Mitra1 email, Ujjwal Maulik2 email and Michael Q Zhang3,4 email

Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India

Department of Computer Science and Engineering, Jadavpur University, Kolkata, India

Watson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA

MOE Key Laboratory of Bioinformatics and Bioinformatics Division, TNLIST, Tsinghua University, Beijing 100084, China

author email corresponding author email

Silence 2010, 1:6doi:10.1186/1758-907X-1-6

Published: 2 February 2010

Additional files

Additional file 1:

Table S1 - Cancer-miRNA Network. A complete list of all the miRNAs involved in different cancer types is provided in Table S1. The table contains the information of cancer type, corresponding miRNA, miRNA's chromosomal location with start and end points, miRNA's expression pattern, technique used to measure the expression level, fold change, P value, cancerous samples and cell lines used in the experiment, non-cancerous samples and cell types, article references and pubmed ids.

Format: XLS Size: 160KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

Table S2 - Cancer specific miRNAs. A list of cancer specific miRNAs, specific tissue type and dysregulation pattern are given in Table S2. Here we consider one miRNA as tissue specific (or cancer specific) if it is significantly dysregulated in at most two cancer tissue types.

Format: XLS Size: 42KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

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